A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3975



Internal ID15538702
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:89870819..90013622hg38UCSC Ensembl
Outerchr11:89603987..89746790hg19UCSC Ensembl
Outerchr11:89243635..89386438hg18UCSC Ensembl
Outerchr11:89243635..89386438hg17UCSC Ensembl
Cytoband11q14.3
Allele length
AssemblyAllele length
hg38142804
hg19142804
hg18142804
hg17142804
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7222
Supporting Variants
SamplesNA12878
Known GenesMIR5692A1, TRIM49D1, TRIM49D2P, TRIM53AP, TRIM64, TRIM64B
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv3975
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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