A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3965610



Internal ID18883261
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:10071433..11889279hg38UCSC Ensembl
Outerchr3:10113117..11930753hg19UCSC Ensembl
Cytoband3p25.2
Allele length
AssemblyAllele length
hg381817847
hg191817637
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1121603
Supporting Variants
SamplesKWS2
Known GenesATG7, ATP2B2, BRK1, FANCD2, FANCD2OS, GHRL, GHRLOS, HRH1, IRAK2, LINC00606, LINC00852, MIR885, SEC13, SLC6A1, SLC6A11, SLC6A1-AS1, TAMM41, TATDN2, VGLL4, VHL
MethodSequencing
AnalysisHugeSeq
PlatformIllumina HiSeq 2000
Comments
ReferenceAlsmadi_et_al_2014
Pubmed ID24896259
Accession Number(s)nssv3965610
Frequency
Sample Size2
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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