A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3900



Internal ID15191941
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:112345104..112383097hg38UCSC Ensembl
Outerchr10:114104862..114142855hg19UCSC Ensembl
Outerchr10:114094852..114132845hg18UCSC Ensembl
Outerchr10:114094852..114132845hg17UCSC Ensembl
Cytoband10q25.2
Allele length
AssemblyAllele length
hg3837994
hg1937994
hg1837994
hg1737994
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv7552
Supporting Variants
SamplesNA12878
Known GenesACSL5, GUCY2GP
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv3900
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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