A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3833



Internal ID15191874
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
OuterchrX:154216668..154330201hg38UCSC Ensembl
OuterchrX:153482137..153558551hg19UCSC Ensembl
OuterchrX:153135331..153211745hg18UCSC Ensembl
OuterchrX:153002984..153079398hg17UCSC Ensembl
CytobandXq28
Allele length
AssemblyAllele length
hg38113534
hg1976415
hg1876415
hg1776415
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7161
Supporting Variants
SamplesNA12878
Known GenesOPN1MW, OPN1MW2, TEX28, TKTL1
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv3833
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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