A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3789



Internal ID15538516
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
OuterchrX:52896360..52998207hg38UCSC Ensembl
OuterchrX:52925388..53027386hg19UCSC Ensembl
OuterchrX:52942113..53044111hg18UCSC Ensembl
OuterchrX:52808409..52910407hg17UCSC Ensembl
CytobandXp11.22
Allele length
AssemblyAllele length
hg38101848
hg19101999
hg18101999
hg17101999
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv7447
Supporting Variants
SamplesNA12878
Known GenesFAM156A, FAM156B
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv3789
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer