A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3770309



Internal ID18964728
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr3:9996548..11875005hg38UCSC Ensembl
chr3:10038232..11916479hg19UCSC Ensembl
Cytoband3p25.2
Allele length
AssemblyAllele length
hg381878458
hg191878248
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1073204
Supporting Variants
SamplesKWP1
Known GenesATG7, ATP2B2, BRK1, CIDECP, EMC3-AS1, FANCD2, FANCD2OS, GHRL, GHRLOS, HRH1, IRAK2, LINC00606, LINC00852, LOC401052, MIR885, SEC13, SLC6A1, SLC6A11, SLC6A1-AS1, TAMM41, TATDN2, VGLL4, VHL
MethodSequencing
AnalysisHugeSeq
PlatformIllumina HiSeq 2000
Comments
ReferenceThareja_et_al_2015
Pubmed ID25765185
Accession Number(s)nssv3770309
Frequency
Sample Size1
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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