A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3721480



Internal ID18673075
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:28689598..30515727hg38UCSC Ensembl
Innerchr15:28934744..30807930hg19UCSC Ensembl
Innerchr15:26733785..28595222hg18UCSC Ensembl
Cytoband15q13.1
Allele length
AssemblyAllele length
hg381826130
hg191873187
hg181861438
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1040778
Supporting Variants
Samples
Known GenesAPBA2, CHRFAM7A, DKFZP434L187, FAM189A1, GOLGA6L7P, GOLGA8J, GOLGA8M, GOLGA8T, LOC100289656, LOC101059918, LOC646278, NDNL2, TJP1, ULK4P1, ULK4P2, ULK4P3, WHAMMP2
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3721480
Frequency
Sample Size29084
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer