A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3640879



Internal ID18592474
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr5:69550464..71358233hg38UCSC Ensembl
Innerchr5:68846291..70654060hg19UCSC Ensembl
Innerchr5:68882047..70689816hg18UCSC Ensembl
Cytoband5q13.2
Allele length
AssemblyAllele length
hg381807770
hg191807770
hg181807770
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1030188
Supporting Variants
Samples
Known GenesGTF2H2, GTF2H2B, GTF2H2C, GTF2H2D, GUSBP3, GUSBP9, LOC100272216, LOC441081, LOC647859, NAIP, OCLN, SERF1A, SERF1B, SMA4, SMA5, SMN1, SMN2
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3640879
Frequency
Sample Size29084
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer