A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3611417



Internal ID18563012
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:195557541..195747880hg38UCSC Ensembl
Innerchr3:195284382..195474751hg19UCSC Ensembl
Innerchr3:196765671..196960422hg18UCSC Ensembl
Cytoband3q29
Allele length
AssemblyAllele length
hg38190340
hg19190370
hg18194752
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1007754
Supporting Variants
Samples
Known GenesAPOD, MIR570, MUC20, MUC4, SDHAP2
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3611417
Frequency
Sample Size29084
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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