A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3563



Internal ID15191605
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr7:102569041..102674021hg38UCSC Ensembl
Outerchr7:102209488..102314468hg19UCSC Ensembl
Outerchr7:101996594..102101704hg18UCSC Ensembl
Outerchr7:101803309..101908419hg17UCSC Ensembl
Cytoband7q22.1
Allele length
AssemblyAllele length
hg38104981
hg19104981
hg18105111
hg17105111
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv5879
Supporting Variants
SamplesNA12878
Known GenesPOLR2J2, POLR2J3, RASA4, RASA4B, SPDYE2, SPDYE2B, UPK3BL
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv3563
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer