A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3562



Internal ID15191604
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr7:102506840..102607078hg38UCSC Ensembl
Outerchr7:102147287..102247525hg19UCSC Ensembl
Outerchr7:101934292..102034591hg18UCSC Ensembl
Outerchr7:101741007..101841306hg17UCSC Ensembl
Cytoband7q22.1
Allele length
AssemblyAllele length
hg38100239
hg19100239
hg18100300
hg17100300
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv5879
Supporting Variants
SamplesNA12878
Known GenesPOLR2J3, RASA4, RASA4B, SPDYE2, SPDYE2B
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv3562
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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