A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3560490



Internal ID18858771
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr17:18416536..18592980hg38UCSC Ensembl
Innerchr17:18319850..18496294hg19UCSC Ensembl
Innerchr17:18260575..18437019hg18UCSC Ensembl
Cytoband17p11.2
Allele length
AssemblyAllele length
hg38176445
hg19176445
hg18176445
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1060524
Supporting Variants
Samples
Known GenesCCDC144B, FAM106A, KRT16P1, LGALS9C, LOC339240, USP32P2
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3560490
Frequency
Sample Size11257
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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