A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3559990



Internal ID18511585
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:88661146..88731220hg38UCSC Ensembl
Innerchr16:88727554..88797628hg19UCSC Ensembl
Innerchr16:87255055..87325129hg18UCSC Ensembl
Cytoband16q24.3
Allele length
AssemblyAllele length
hg3870075
hg1970075
hg1870075
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1065973
Supporting Variants
Samples
Known GenesCTU2, LOC100289580, MIR4722, MVD, PIEZO1, RNF166, SNAI3, SNAI3-AS1
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3559990
Frequency
Sample Size29084
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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