A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3558117



Internal ID18509712
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:18284986..18751122hg38UCSC Ensembl
Innerchr16:18378843..18762444hg19UCSC Ensembl
Innerchr16:18286344..18669945hg18UCSC Ensembl
Cytoband16p12.3
Allele length
AssemblyAllele length
hg38466137
hg19383602
hg18383602
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1041748
Supporting Variants
Samples
Known GenesABCC6P1, LOC100288162, MIR3179-1, MIR3179-2, MIR3179-3, MIR3180-1, MIR3180-2, MIR3180-3, MIR6511A-2, MIR6770-2, NOMO2, NPIPA7, NPIPA8
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3558117
Frequency
Sample Size29084
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer