A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3557994



Internal ID18509589
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:16201938..16598788hg38UCSC Ensembl
Innerchr16:16295795..16692645hg19UCSC Ensembl
Innerchr16:16203296..16600146hg18UCSC Ensembl
Cytoband16p13.11
Allele length
AssemblyAllele length
hg38396851
hg19396851
hg18396851
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1044473
Supporting Variants
Samples
Known GenesABCC6, LOC100288162, MIR3179-1, MIR3179-2, MIR3179-3, MIR3180-1, MIR3180-2, MIR3180-3, MIR6511A-2, MIR6770-2, NOMO3, NPIPA7, NPIPA8, PKD1P1
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3557994
Frequency
Sample Size29084
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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