A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3557967



Internal ID18509562
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:15388065..18191217hg38UCSC Ensembl
Innerchr16:15481922..18285074hg19UCSC Ensembl
Innerchr16:15389423..18192575hg18UCSC Ensembl
Cytoband16p12.3
Allele length
AssemblyAllele length
hg382803153
hg192803153
hg182803153
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1049647
Supporting Variants
Samples
Known GenesABCC1, ABCC6, C16orf45, FOPNL, KIAA0430, LOC100288162, MIR3179-1, MIR3179-2, MIR3179-3, MIR3180-1, MIR3180-2, MIR3180-3, MIR484, MIR6506, MIR6511A-2, MIR6770-2, MPV17L, MYH11, NDE1, NOMO3, NPIPA7, NPIPA8, PKD1P1, XYLT1
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3557967
Frequency
Sample Size29084
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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