A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3557582



Internal ID18509177
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:14869830..15014718hg38UCSC Ensembl
Innerchr16:14963687..15108575hg19UCSC Ensembl
Innerchr16:14871188..15016076hg18UCSC Ensembl
Cytoband16p13.11
Allele length
AssemblyAllele length
hg38144889
hg19144889
hg18144889
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1046124
Supporting Variants
Samples
Known GenesLOC100288162, MIR1972-1, MIR1972-2, MIR3179-1, MIR3179-2, MIR3179-3, MIR3180-1, MIR3180-2, MIR3180-3, MIR6511A-2, MIR6770-2, NOMO1, NPIPA1, PDXDC1
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3557582
Frequency
Sample Size29084
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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