A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3557557



Internal ID18855838
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:14802328..14993308hg38UCSC Ensembl
Innerchr16:14896185..15087165hg19UCSC Ensembl
Innerchr16:14803686..14994666hg18UCSC Ensembl
Cytoband16p13.11
Allele length
AssemblyAllele length
hg38190981
hg19190981
hg18190981
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1044179
Supporting Variants
Samples
Known GenesABCC6P2, LOC100288162, MIR3179-1, MIR3179-2, MIR3179-3, MIR3180-1, MIR3180-2, MIR3180-3, MIR6511A-2, MIR6770-2, NOMO1, NPIPA1, PDXDC1
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3557557
Frequency
Sample Size11257
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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