A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3556977



Internal ID18508572
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:5013335..5074451hg38UCSC Ensembl
Innerchr16:5063336..5124452hg19UCSC Ensembl
Innerchr16:5003337..5064453hg18UCSC Ensembl
Cytoband16p13.3
Allele length
AssemblyAllele length
hg3861117
hg1961117
hg1861117
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1039432
Supporting Variants
Samples
Known GenesALG1, C16orf89, NAGPA, NAGPA-AS1, SEC14L5
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3556977
Frequency
Sample Size29084
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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