A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3550403



Internal ID18848684
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:32197413..33822829hg38UCSC Ensembl
Innerchr16:32208734..33625296hg19UCSC Ensembl
Innerchr16:32116235..33532797hg18UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg381625417
hg191416563
hg181416563
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1056017
Supporting Variants
Samples
Known GenesLOC390705, RNU6-76P, SLC6A10P, TP53TG3, TP53TG3B, TP53TG3C, TP53TG3D
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3550403
Frequency
Sample Size11257
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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