A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3550222



Internal ID18848503
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr17:46234092..46576019hg38UCSC Ensembl
Innerchr17:44311458..44653385hg19UCSC Ensembl
Innerchr17:41667235..42008701hg18UCSC Ensembl
Cytoband17q21.31
Allele length
AssemblyAllele length
hg38341928
hg19341928
hg18341467
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1064248
Supporting Variants
Samples
Known GenesARL17A, ARL17B, LOC644172, LRRC37A, LRRC37A2, NSFP1
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3550222
Frequency
Sample Size11257
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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