A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3549338



Internal ID18847619
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:32069540..32779936hg38UCSC Ensembl
Innerchr16:32080861..32791257hg19UCSC Ensembl
Innerchr16:31988362..32698758hg18UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg38710397
hg19710397
hg18710397
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1063972
Supporting Variants
Samples
Known GenesHERC2P4, LOC390705, TP53TG3, TP53TG3B, TP53TG3C, TP53TG3D
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3549338
Frequency
Sample Size11257
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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