A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3549249



Internal ID18847530
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:32022053..34009022hg38UCSC Ensembl
Innerchr16:32033374..33811489hg19UCSC Ensembl
Innerchr16:31940875..33718990hg18UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg381986970
hg191778116
hg181778116
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1066185
Supporting Variants
Samples
Known GenesHERC2P4, LOC390705, RNU6-76P, SLC6A10P, TP53TG3, TP53TG3B, TP53TG3C, TP53TG3D
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3549249
Frequency
Sample Size11257
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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