A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3549172



Internal ID18500767
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:31960187..33086089hg38UCSC Ensembl
Innerchr16:31971508..33097410hg19UCSC Ensembl
Innerchr16:31879009..33004911hg18UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg381125903
hg191125903
hg181125903
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1058223
Supporting Variants
Samples
Known GenesHERC2P4, LOC390705, SLC6A10P, TP53TG3, TP53TG3B, TP53TG3C, TP53TG3D
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3549172
Frequency
Sample Size29084
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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