A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3540846



Internal ID18839127
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20406104..21065709hg38UCSC Ensembl
Innerchr15:20611357..21271038hg19UCSC Ensembl
Innerchr15:18871371..19535697hg18UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg38659606
hg19659682
hg18664327
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1055062
Supporting Variants
Samples
Known GenesCT60, CXADRP2, GOLGA6L6, GOLGA8CP, HERC2P3, LOC646214, NBEAP1, NF1P2, POTEB, POTEB2
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3540846
Frequency
Sample Size11257
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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