A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3540823



Internal ID18839104
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20397153..22168141hg38UCSC Ensembl
Innerchr15:20602406..22456092hg19UCSC Ensembl
Innerchr15:18862420..19957456hg18UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg381770989
hg191853687
hg181095037
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1046154
Supporting Variants
Samples
Known GenesCT60, CXADRP2, GOLGA6L6, GOLGA8CP, HERC2P3, LOC646214, LOC727924, NBEAP1, NF1P2, OR4M2, OR4N3P, OR4N4, POTEB, POTEB2
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3540823
Frequency
Sample Size11257
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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