A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3540820



Internal ID18839101
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20396787..22112595hg38UCSC Ensembl
Innerchr15:20602040..22400546hg19UCSC Ensembl
Innerchr15:18862054..19901910hg18UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg381715809
hg191798507
hg181039857
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1049656
Supporting Variants
Samples
Known GenesCT60, CXADRP2, GOLGA6L6, GOLGA8CP, HERC2P3, LOC646214, LOC727924, NBEAP1, NF1P2, OR4M2, OR4N4, POTEB, POTEB2
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3540820
Frequency
Sample Size11257
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer