A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3540819



Internal ID18839100
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20396787..21997806hg38UCSC Ensembl
Innerchr15:20602040..22285757hg19UCSC Ensembl
Innerchr15:18862054..19787121hg18UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg381601020
hg191683718
hg18925068
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1038869
Supporting Variants
Samples
Known GenesCT60, CXADRP2, GOLGA6L6, GOLGA8CP, HERC2P3, LOC646214, LOC727924, NBEAP1, NF1P2, POTEB, POTEB2
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3540819
Frequency
Sample Size11257
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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