A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3540818



Internal ID18839099
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20396787..20988783hg38UCSC Ensembl
Innerchr15:20602040..21194112hg19UCSC Ensembl
Innerchr15:18862054..19458771hg18UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg38591997
hg19592073
hg18596718
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1047154
Supporting Variants
Samples
Known GenesCT60, CXADRP2, GOLGA6L6, GOLGA8CP, HERC2P3, LOC646214, NBEAP1, NF1P2, POTEB, POTEB2
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3540818
Frequency
Sample Size11257
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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