A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3539693



Internal ID18837974
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20396289..22168141hg38UCSC Ensembl
Innerchr15:20601542..22456092hg19UCSC Ensembl
Innerchr15:18861556..19957456hg18UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg381771853
hg191854551
hg181095901
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1042842
Supporting Variants
Samples
Known GenesCT60, CXADRP2, GOLGA6L6, GOLGA8CP, HERC2P3, LOC646214, LOC727924, NBEAP1, NF1P2, OR4M2, OR4N3P, OR4N4, POTEB, POTEB2
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3539693
Frequency
Sample Size11257
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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