A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3539526



Internal ID18837807
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20235273..22308242hg38UCSC Ensembl
Innerchr15:20440526..22673387hg19UCSC Ensembl
Innerchr15:18700540..20224751hg18UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg382072970
hg192232862
hg181524212
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1042516
Supporting Variants
Samples
Known GenesCHEK2P2, CT60, CXADRP2, GOLGA6L6, GOLGA8CP, HERC2P3, LOC646214, LOC727924, NBEAP1, NF1P2, OR4M2, OR4N3P, OR4N4, POTEB, POTEB2, REREP3
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3539526
Frequency
Sample Size11257
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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