A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3538849



Internal ID18490444
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:22413906..23199681hg38UCSC Ensembl
Innerchr15:22673387..23459190hg19UCSC Ensembl
Innerchr15:20224751..21010631hg18UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg38785776
hg19785804
hg18785881
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1051299
Supporting Variants
Samples
Known GenesCYFIP1, GOLGA6L1, GOLGA8DP, GOLGA8EP, GOLGA8I, HERC2P2, HERC2P7, LOC283683, MIR4509-1, MIR4509-2, MIR4509-3, NIPA1, NIPA2, TUBGCP5, WHAMMP3
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3538849
Frequency
Sample Size29084
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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