A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3538686



Internal ID18836967
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20380825..22472558hg38UCSC Ensembl
Innerchr15:20586078..22751770hg19UCSC Ensembl
Innerchr15:18846092..20303134hg18UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg382091734
hg192165693
hg181457043
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1041504
Supporting Variants
Samples
Known GenesCT60, CXADRP2, GOLGA6L1, GOLGA6L6, GOLGA8CP, GOLGA8DP, HERC2P3, LOC646214, LOC727924, MIR4509-1, MIR4509-2, MIR4509-3, NBEAP1, NF1P2, OR4M2, OR4N3P, OR4N4, POTEB, POTEB2, REREP3
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3538686
Frequency
Sample Size11257
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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