A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3538407



Internal ID18836688
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20056971..22033266hg38UCSC Ensembl
Innerchr15:20262224..22321217hg19UCSC Ensembl
Innerchr15:18522238..19822581hg18UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg381976296
hg192058994
hg181300344
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1045988
Supporting Variants
Samples
Known GenesCHEK2P2, CT60, CXADRP2, GOLGA6L6, GOLGA8CP, HERC2P3, LOC646214, LOC727924, NBEAP1, NF1P2, POTEB, POTEB2
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3538407
Frequency
Sample Size11257
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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