A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3538063



Internal ID18836344
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20190264..22295446hg38UCSC Ensembl
Innerchr15:20395517..22583397hg19UCSC Ensembl
Innerchr15:18655531..20084761hg18UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg382105183
hg192187881
hg181429231
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1038454
Supporting Variants
Samples
Known GenesCHEK2P2, CT60, CXADRP2, GOLGA6L6, GOLGA8CP, HERC2P3, LOC646214, LOC727924, NBEAP1, NF1P2, OR4M2, OR4N3P, OR4N4, POTEB, POTEB2, REREP3
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3538063
Frequency
Sample Size11257
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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