A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3519188



Internal ID18470783
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:46395843..46962260hg38UCSC Ensembl
Innerchr10:46590219..47153919hg19UCSC Ensembl
Innerchr10:46010225..46573925hg18UCSC Ensembl
Cytoband10q11.21
Allele length
AssemblyAllele length
hg38566418
hg19563701
hg18563701
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1052359
Supporting Variants
Samples
Known GenesBMS1P1, BMS1P5, FAM35BP, FRMPD2P1, GLUD1P7, GPRIN2, HNRNPA1P33, LINC00842, LOC100996758, NPY4R, PTPN20A, PTPN20B, SYT15
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3519188
Frequency
Sample Size29084
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer