A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3517731



Internal ID18469326
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:5314713..6042512hg38UCSC Ensembl
Innerchr11:5335943..6063742hg19UCSC Ensembl
Innerchr11:5292519..6020318hg18UCSC Ensembl
Cytoband11p15.4
Allele length
AssemblyAllele length
hg38727800
hg19727800
hg18727800
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1046068
Supporting Variants
Samples
Known GenesOR51B2, OR51B5, OR51B6, OR51I1, OR51I2, OR51M1, OR51Q1, OR52B6, OR52D1, OR52E4, OR52E6, OR52E8, OR52H1, OR52L1, OR52N1, OR52N2, OR52N4, OR52N5, OR56A1, OR56A3, OR56A4, OR56A5, OR56B1, TRIM22, TRIM34, TRIM5, TRIM6, TRIM6-TRIM34, UBQLN3, UBQLNL
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3517731
Frequency
Sample Size29084
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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