A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3513204



Internal ID18464799
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:5564486..5744458hg38UCSC Ensembl
Innerchr11:5585716..5765688hg19UCSC Ensembl
Innerchr11:5542292..5722264hg18UCSC Ensembl
Cytoband11p15.4
Allele length
AssemblyAllele length
hg38179973
hg19179973
hg18179973
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1041568
Supporting Variants
Samples
Known GenesOR52B6, OR56B1, TRIM22, TRIM34, TRIM5, TRIM6, TRIM6-TRIM34
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3513204
Frequency
Sample Size29084
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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