A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3500920



Internal ID19088561
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:161548149..161649256hg38UCSC Ensembl
Innerchr1:161517939..161619046hg19UCSC Ensembl
Innerchr1:159784563..159885670hg18UCSC Ensembl
Cytoband1q23.3
Allele length
AssemblyAllele length
hg38101108
hg19101108
hg18101108
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1001586
Supporting Variants
Samples
Known GenesFCGR2C, FCGR3A, FCGR3B, HSPA7
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3500920
Frequency
Sample Size11257
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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