A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3499554



Internal ID18740509
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:109650144..109697544hg38UCSC Ensembl
Innerchr1:110192766..110240166hg19UCSC Ensembl
Innerchr1:109994289..110041689hg18UCSC Ensembl
Cytoband1p13.3
Allele length
AssemblyAllele length
hg3847401
hg1947401
hg1847401
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1011397
Supporting Variants
Samples
Known GenesGSTM1, GSTM2, GSTM4
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3499554
Frequency
Sample Size29084
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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