A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3490779



Internal ID19078420
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr1:152492368..152546721hg38UCSC Ensembl
Innerchr1:152464844..152519197hg19UCSC Ensembl
Innerchr1:150731468..150785821hg18UCSC Ensembl
Cytoband1q21.3
Allele length
AssemblyAllele length
hg3854354
hg1954354
hg1854354
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv1005553
Supporting Variants
Samples
Known GenesCRCT1, LCE5A
MethodSNP array
AnalysisAffymetrix SNP array copy number analysis
PlatformAffymetrix SNP Array 6.0
Comments
ReferenceCoe_et_al_2014
Pubmed ID25217958
Accession Number(s)nssv3490779
Frequency
Sample Size11257
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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