A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3488



Internal ID15191530
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:165300474..165320575hg38UCSC Ensembl
Outerchr6:165713963..165734064hg19UCSC Ensembl
Outerchr6:165633953..165654054hg18UCSC Ensembl
Outerchr6:165684374..165704475hg17UCSC Ensembl
Cytoband6q27
Allele length
AssemblyAllele length
hg3820102
hg1920102
hg1820102
hg1720102
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv5586
Supporting Variants
SamplesNA12878
Known GenesC6orf118
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv3488
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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