A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3439



Internal ID15191481
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:54061438..54085182hg38UCSC Ensembl
Outerchr6:53926236..53949980hg19UCSC Ensembl
Outerchr6:54034195..54057939hg18UCSC Ensembl
Outerchr6:54034195..54057939hg17UCSC Ensembl
Cytoband6p12.1
Allele length
AssemblyAllele length
hg3823745
hg1923745
hg1823745
hg1723745
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv5307
Supporting Variants
SamplesNA12878
Known GenesMLIP
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv3439
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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