A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3408



Internal ID15538136
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr5:178648099..178689014hg38UCSC Ensembl
Outerchr5:178075100..178116015hg19UCSC Ensembl
Outerchr5:178007706..178048621hg18UCSC Ensembl
Outerchr5:178007706..178048621hg17UCSC Ensembl
Cytoband5q35.3
Allele length
AssemblyAllele length
hg3840916
hg1940916
hg1840916
hg1740916
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv5155
Supporting Variants
SamplesNA12878
Known Genes
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv3408
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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