A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3172



Internal ID15537900
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:68558861..68595116hg38UCSC Ensembl
Outerchr3:68608012..68644267hg19UCSC Ensembl
Outerchr3:68690702..68726957hg18UCSC Ensembl
Outerchr3:68690702..68726957hg17UCSC Ensembl
Cytoband3p14.1
Allele length
AssemblyAllele length
hg3836256
hg1936256
hg1836256
hg1736256
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv3862
Supporting Variants
SamplesNA12878
Known Genes
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv3172
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer