A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3019957



Internal ID15217906
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chrX:38656111..38656111hg38UCSC Ensembl
chrX:38515364..38515364hg19UCSC Ensembl
chrX:38400308..38400308hg18UCSC Ensembl
chrX:38271581..38271581hg17UCSC Ensembl
CytobandXp11.4
Allele length
AssemblyAllele length
hg381
hg191
hg181
hg171
Variant TypeCNV novel sequence insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv477861
Supporting Variants
SamplesNA18517
Known GenesTSPAN7
MethodSequencing
AnalysisSearch fosmid ESPs as described in Tuzun et al (2005)
PlatformAgilent Custom Human 244K CGH Array
CommentsOEA singleton. The coordinate provided is from the mappable member of a fosmid end sequence pair, and indicates the genomic vicinity of a novel sequence insertion
ReferenceKidd_et_al_2010
Pubmed ID20440878
Accession Number(s)nssv3019957
Frequency
Sample Size9
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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