A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3016980



Internal ID15219600
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr6:138102135..138102135hg38UCSC Ensembl
chr6:138423272..138423272hg19UCSC Ensembl
chr6:138464965..138464965hg18UCSC Ensembl
chr6:138464965..138464965hg17UCSC Ensembl
Cytoband6q23.3
Allele length
AssemblyAllele length
hg381
hg191
hg181
hg171
Variant TypeCNV novel sequence insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv472367
Supporting Variants
SamplesNA18555
Known GenesPERP
MethodSequencing
AnalysisSearch fosmid ESPs as described in Tuzun et al (2005)
PlatformAgilent Custom Human 244K CGH Array
CommentsOEA singleton. The coordinate provided is from the mappable member of a fosmid end sequence pair, and indicates the genomic vicinity of a novel sequence insertion
ReferenceKidd_et_al_2010
Pubmed ID20440878
Accession Number(s)nssv3016980
Frequency
Sample Size9
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer