A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3016061



Internal ID15218631
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr17:68588197..68588197hg38UCSC Ensembl
chr17:66584338..66584338hg19UCSC Ensembl
chr17:64095933..64095933hg18UCSC Ensembl
chr17:64095933..64095933hg17UCSC Ensembl
Cytoband17q24.2
Allele length
AssemblyAllele length
hg381
hg191
hg181
hg171
Variant TypeCNV novel sequence insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv477917
Supporting Variants
SamplesNA18517
Known GenesFAM20A
MethodSequencing
AnalysisSearch fosmid ESPs as described in Tuzun et al (2005)
PlatformAgilent Custom Human 244K CGH Array
CommentsOEA singleton. The coordinate provided is from the mappable member of a fosmid end sequence pair, and indicates the genomic vicinity of a novel sequence insertion
ReferenceKidd_et_al_2010
Pubmed ID20440878
Accession Number(s)nssv3016061
Frequency
Sample Size9
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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