A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3010798



Internal ID15220106
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
chr1:198540860..198540860hg38UCSC Ensembl
chr1:198509990..198509990hg19UCSC Ensembl
chr1:196776613..196776613hg18UCSC Ensembl
chr1:195241647..195241647hg17UCSC Ensembl
Cytoband1q31.3
Allele length
AssemblyAllele length
hg381
hg191
hg181
hg171
Variant TypeCNV novel sequence insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv474653
Supporting Variants
SamplesNA18956
Known GenesATP6V1G3
MethodSequencing
AnalysisSearch fosmid ESPs as described in Tuzun et al (2005)
PlatformAgilent Custom Human 244K CGH Array
CommentsOEA singleton. The coordinate provided is from the mappable member of a fosmid end sequence pair, and indicates the genomic vicinity of a novel sequence insertion
ReferenceKidd_et_al_2010
Pubmed ID20440878
Accession Number(s)nssv3010798
Frequency
Sample Size9
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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