A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv2995960



Internal ID15234820
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:88633593..90228345hg38UCSC Ensembl
Outerchr16:88700001..90354753hg19UCSC Ensembl
Cytoband16q24.3
Allele length
AssemblyAllele length
hg381594753
hg191654753
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv482951
Supporting Variants
Samples
Known GenesACSF3, AFG3L1P, ANKRD11, APRT, C16orf3, CBFA2T3, CDH15, CDK10, CDT1, CENPBD1, CHMP1A, CPNE7, CTU2, CYBA, DBNDD1, DEF8, DPEP1, FANCA, GALNS, GAS8, IL17C, LINC00304, LOC100287036, LOC100289580, LOC400558, MC1R, MIR4722, MVD, PABPN1L, PIEZO1, PRDM7, RNF166, RPL13, SLC22A31, SNAI3, SNAI3-AS1, SNORD68, SPATA2L, SPATA33, SPG7, SPIRE2, TCF25, TRAPPC2L, TUBB3, URAHP, VPS9D1, VPS9D1-AS1, ZNF276, ZNF778
MethodBAC aCGH
Analysis
PlatformSpectral Genomics 2600 BAC array
Comments
ReferenceIafrate_et_al_2004
Pubmed ID15286789
Accession Number(s)nssv2995960
Frequency
Sample Size39
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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